Selection and persistence of antimicrobial-resistant Escherichia coli including extended-spectrum β-lactamase producers in different poultry flocks on one chicken farm

Microb Drug Resist. 2013 Dec;19(6):498-506. doi: 10.1089/mdr.2012.0257. Epub 2013 Jul 11.

Abstract

Escherichia coli isolates (n=438) from six different broiler chicken flocks (all in, all out) with known consumption of antimicrobials were investigated for their antimicrobial resistance and the prevalence of extended-spectrum β-lactamase (ESBL) phenotypes. E. coli were isolated from chicken at the third and fifth week of age and tested for antimicrobial resistance during the course of fattening. Resistance to sulfamethoxazole+trimethoprim, which was used in four flocks within the first days of life, decreased significantly in all six flocks between the third and fifth week of broiler chicken's life (mean 65.9% vs. 54.3%). By contrast, resistance to spectinomycin increased significantly in all six flocks within the same period (mean 36.1% vs. 57.0%); doxycycline resistance increased significantly in five of six flocks (mean 19.2% vs. 41.7%), although both substances were not used for treatment. Of the sulfonamide resistance genes sul1, sul2, and sul3, sul2 was most frequently found (up to 60%). The prevalence of sul2 increased significantly between weeks 3 and 5, if the chicken were treated with sulfamethoxazole + trimethoprim in the first days of life. If sulfamethoxazole + trimethoprim was not used, then the prevalence of sul2 decreased significantly in the same period. The prevalence of sul1+qacEΔ1 (classical class 1 integrons) was significantly higher in E. coli from sulfamethoxazole + trimethoprim-treated flocks (9.63%), compared to untreated flocks (2.92%). The detection of phenotypes that potentially indicate plasmid-borne AmpC-β-lactamases was inversely associated with sulfamethoxazole + trimethoprim treatment. ESBL phenotypes were found without selective enrichment in four of six flocks. Of all isolated E. coli, 1.8% (n=8) had an ESBL phenotype. ESBL strains differed in their accompanying resistances and/or enterobacterial repetitive intergenic consensus sequences. In conclusion, clonal dissemination seems not to be a major cause of ESBL detection on a chicken farm with all-in all-out production mode.

MeSH terms

  • Animals
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism
  • Chickens / microbiology*
  • DNA, Intergenic
  • Drug Resistance, Multiple, Bacterial / drug effects
  • Drug Resistance, Multiple, Bacterial / genetics*
  • Escherichia coli / drug effects
  • Escherichia coli / genetics*
  • Escherichia coli / isolation & purification
  • Escherichia coli Infections / drug therapy
  • Escherichia coli Infections / microbiology
  • Escherichia coli Infections / veterinary*
  • Escherichia coli Proteins / genetics*
  • Escherichia coli Proteins / metabolism
  • Integrons
  • Plasmids
  • Poultry Diseases / drug therapy
  • Poultry Diseases / microbiology*
  • Protein Isoforms / genetics
  • Protein Isoforms / metabolism
  • Spectinomycin / pharmacology
  • Trimethoprim, Sulfamethoxazole Drug Combination / pharmacology
  • beta-Lactamases / genetics*
  • beta-Lactamases / metabolism
  • beta-Lactams / pharmacology

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • DNA, Intergenic
  • Escherichia coli Proteins
  • Protein Isoforms
  • Sul1 protein, E coli
  • beta-Lactams
  • Trimethoprim, Sulfamethoxazole Drug Combination
  • Spectinomycin
  • AmpC beta-lactamases
  • beta-Lactamases