Targeting non-B-form DNA in living cells

Chem Rec. 2013 Aug;13(4):371-84. doi: 10.1002/tcr.201300005. Epub 2013 Jul 4.

Abstract

Under certain conditions, repetitive DNA motifs have the potential to adopt non-B-form DNA structures, such as hairpins, triplexes, Z-DNA, quadruplexes, and i-motifs. Some non-B-form DNAs have been proposed to cause mutations and, consequently, participate in several biologically important processes, including regulation, evolution, and human disease. Advancement in the knowledge of specific interactions between molecules and non-B-form DNAs at the molecular level in living cells is important for understanding their biological functions. In this review, we describe the latest studies on molecules that target non-B-form DNAs in vivo, with a focus on Z-DNA, G-quadruplexes, triplexes, i-motifs, and hairpins.

Keywords: DNA; biological activity; ligand effects; proteins; specific binding.

Publication types

  • Research Support, Non-U.S. Gov't
  • Review

MeSH terms

  • Cell Survival
  • DNA / chemistry*
  • DNA / genetics
  • DNA / metabolism*
  • DNA, Z-Form / chemistry
  • DNA, Z-Form / genetics
  • DNA, Z-Form / metabolism
  • G-Quadruplexes
  • Humans
  • Models, Molecular
  • Neoplasms / genetics
  • Neoplasms / metabolism
  • Neoplasms / pathology
  • Nucleic Acid Conformation*
  • Nucleotide Motifs

Substances

  • DNA, Z-Form
  • triplex DNA
  • DNA