Isolation of circulating microRNA associated with RNA-binding protein

Methods Mol Biol. 2013:1024:97-107. doi: 10.1007/978-1-62703-453-1_8.

Abstract

Circulating microRNAs (miRNAs) have been recently detected in extracellular body fluids and proved themselves as promising biomarkers for a broad spectrum of diseases. The techniques to isolate, detect, and characterize extracellular miRNAs vary significantly from report to report. In this chapter we describe a consistent, efficient and highly reproducible protocol for isolation and detection of microvesicles-free circulating miRNA from human blood plasma or cell culture media. Furthermore, since exosomes-free circulating miRNAs are associated with Argonaut proteins (the same proteins to which miRNAs are bound inside the cell), we provide a protocol for immunoprecipitation of AGO2 associated miRNAs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antibodies, Monoclonal / chemistry
  • Argonaute Proteins / isolation & purification*
  • Argonaute Proteins / metabolism
  • Culture Media, Conditioned / chemistry
  • Humans
  • Immunoprecipitation
  • Leukocytes, Mononuclear / chemistry*
  • Leukocytes, Mononuclear / cytology
  • Leukocytes, Mononuclear / metabolism
  • MicroRNAs / classification
  • MicroRNAs / isolation & purification*
  • Oligonucleotide Array Sequence Analysis
  • Protein Binding
  • Real-Time Polymerase Chain Reaction
  • Reverse Transcriptase Polymerase Chain Reaction

Substances

  • AGO2 protein, human
  • Antibodies, Monoclonal
  • Argonaute Proteins
  • Culture Media, Conditioned
  • MicroRNAs