Expression profile analysis of antioxidative stress and developmental pathway genes in the manganese-exposed intertidal copepod Tigriopus japonicus with 6K oligochip

Chemosphere. 2013 Aug;92(9):1214-23. doi: 10.1016/j.chemosphere.2013.04.047. Epub 2013 May 25.

Abstract

Manganese (Mn) provides one of aquatic pollutants in marine ecosystem. Here we used a 6K oligomicroarray to identify the effect of Mn on transcriptomes in the copepod Tigriopus japonicus. A total of 5594 spots were significantly modulated on a 6K oligomicroarray with hierarchical clustering after exposure to Mn over 24h. Of them, 186 and 489 genes were significantly upregulated and downregulated, respectively. Particularly, several genes involved in stress, detoxification, and developmental functions were significantly modulated in T. japonicus exposed for 24h. In detail, Mn exposure specifically up-regulated genes that were related to intracellular stress, antioxidant, and detoxification pathways such as cytochrome P450s (CYPs), glutathione S-transferases (GSTs), and heat shock proteins (hsps), while a majority of downregulated genes was associated with developmental pathways such as cuticle protein, ecdysone receptor, and vitellogenin. These results demonstrated that Mn exposure modulated gene expression in relation to intracellular stress, leading to developmental retardation in the intertidal copepod, T. japonicus, and provide a better understanding of mechanistic molecular studies of Mn-induced cellular damage.

Keywords: Gene expression; Microarray; Mn; Real-time RT-PCR; Tigriopus japonicus.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cluster Analysis
  • Copepoda / drug effects*
  • Copepoda / metabolism
  • Cytochrome P-450 Enzyme System / genetics
  • Cytochrome P-450 Enzyme System / metabolism
  • Down-Regulation / drug effects
  • Gene Expression Regulation, Developmental / drug effects
  • Glutathione Transferase / genetics
  • Glutathione Transferase / metabolism
  • Heat-Shock Proteins / genetics
  • Heat-Shock Proteins / metabolism
  • Manganese / chemistry
  • Manganese / toxicity*
  • Oligonucleotide Array Sequence Analysis
  • RNA, Messenger / metabolism
  • Receptors, Steroid / genetics
  • Receptors, Steroid / metabolism
  • Up-Regulation / drug effects
  • Vitellogenins / genetics
  • Vitellogenins / metabolism
  • Water Pollutants, Chemical / chemistry
  • Water Pollutants, Chemical / toxicity*

Substances

  • Heat-Shock Proteins
  • RNA, Messenger
  • Receptors, Steroid
  • Vitellogenins
  • Water Pollutants, Chemical
  • ecdysone receptor
  • Manganese
  • Cytochrome P-450 Enzyme System
  • Glutathione Transferase