Role of central metabolism in the osmoadaptation of the halophilic bacterium Chromohalobacter salexigens

J Biol Chem. 2013 Jun 14;288(24):17769-81. doi: 10.1074/jbc.M113.470567. Epub 2013 Apr 24.

Abstract

Bacterial osmoadaptation involves the cytoplasmic accumulation of compatible solutes to counteract extracellular osmolarity. The halophilic and highly halotolerant bacterium Chromohalobacter salexigens is able to grow up to 3 m NaCl in a minimal medium due to the de novo synthesis of ectoines. This is an osmoregulated pathway that burdens central metabolic routes by quantitatively drawing off TCA cycle intermediaries. Consequently, metabolism in C. salexigens has adapted to support this biosynthetic route. Metabolism of C. salexigens is more efficient at high salinity than at low salinity, as reflected by lower glucose consumption, lower metabolite overflow, and higher biomass yield. At low salinity, by-products (mainly gluconate, pyruvate, and acetate) accumulate extracellularly. Using [1-(13)C]-, [2-(13)C]-, [6-(13)C]-, and [U-(13)C6]glucose as carbon sources, we were able to determine the main central metabolic pathways involved in ectoines biosynthesis from glucose. C. salexigens uses the Entner-Doudoroff pathway rather than the standard glycolytic pathway for glucose catabolism, and anaplerotic activity is high to replenish the TCA cycle with the intermediaries withdrawn for ectoines biosynthesis. Metabolic flux ratios at low and high salinity were similar, revealing a certain metabolic rigidity, probably due to its specialization to support high biosynthetic fluxes and partially explaining why metabolic yields are so highly affected by salinity. This work represents an important contribution to the elucidation of specific metabolic adaptations in compatible solute-accumulating halophilic bacteria.

Keywords: Ectoines; Entner-Doudoroff; Halophilic Bacteria; Metabolic Tracers; Metabolism; Microbiology; Nuclear Magnetic Resonance; Overflow Metabolism; Pyruvate Carboxylase; Salt Adaptation.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acids / metabolism
  • Amino Acids, Diamino / biosynthesis
  • Bacterial Proteins / genetics
  • Biomass
  • Carbohydrate Metabolism
  • Carboxylic Acids / metabolism
  • Chromohalobacter / genetics
  • Chromohalobacter / growth & development
  • Chromohalobacter / metabolism*
  • Citric Acid Cycle
  • Computational Biology
  • Glucose / metabolism
  • Metabolic Networks and Pathways
  • Salinity
  • Salt Tolerance*
  • Sodium Chloride / metabolism
  • Staining and Labeling

Substances

  • Amino Acids
  • Amino Acids, Diamino
  • Bacterial Proteins
  • Carboxylic Acids
  • Sodium Chloride
  • ectoine
  • Glucose