Studies on salinization in Haryana soils on free-living nitrogen-fixing bacterial populations and their activity

J Basic Microbiol. 2014 Mar;54(3):170-9. doi: 10.1002/jobm.201200158. Epub 2013 Apr 2.

Abstract

A total of 26 soil samples from saline soils of Haryana were collected. Based on their electrical conductivity (EC) values, which varied from 1.04 to 21.00 dS m(-1), the soils were categorized into non-saline soils (EC 0-2 dS m(-1)), weakly saline soils (EC 2-4 dS m(-1)), saline soils (EC 4-8 dS m(-1)), strongly saline soils (EC 8-16 dS m(-1)), and very strongly saline soils (EC >16 dS m(-1)). The pH values of these soil samples ranged from 6.03 to 8.62, while organic C, total N, and available P were in the range of 0.06-0.94%, 0.07-0.15%, and 0.11-0.29 μg g(-1) soil, respectively. As a measure of the impact of salinity on free-living N(2) fixers and their activity, the total bacterial populations on four media (Jensen's nitrogen-free medium, malate medium, Burk's medium, and soil extract agar medium) decreased from 6.12 to 3.70 log CFU g(-1) soil with increasing salinity level. PCR amplification of the nifH region of the DNA from 234 selected morphotypes from all the media showed the presence of nifH in 71 isolates. Out of these, 37% of the isolates were obtained using Jensen's medium; 35, 28, and 21% of the isolates were obtained using soil extract medium, Burk's medium, and malate medium, respectively. The majority of the free-living N(2) fixers (67%) were Gram negative. Apart from the acetylene reduction assay (ARA) activity in these isolates, other beneficial traits like ammonia excretion and indole acetic acid (IAA) production were also present. A decreasing trend in the activities was observed with increasing salinity levels. Isolates JN6, BP8, and MJ4 showed the highest ARA activity, ammonia excretion, and IAA production. The performance of isolates like BNC2 with good ARA activity, ammonia excretion, and IAA production and isolated from a very strongly saline soil should be further evaluated under high-saline conditions.

Keywords: ARA; Ammonia; Diazotrophs; Free-living N2 fixers; IAA; Salinity; nifH amplification.

MeSH terms

  • Acetylene / metabolism
  • Ammonia / metabolism
  • Bacteria / isolation & purification*
  • Bacteria / metabolism
  • Gram-Negative Bacteria / metabolism
  • India
  • Indoleacetic Acids / metabolism
  • Nitrogen Fixation*
  • Plant Weeds / microbiology
  • Rhizosphere
  • Salinity*
  • Soil / chemistry*
  • Soil Microbiology*

Substances

  • Indoleacetic Acids
  • Soil
  • indoleacetic acid
  • Ammonia
  • Acetylene