The Arabidopsis COP9 SIGNALOSOME INTERACTING F-BOX KELCH 1 protein forms an SCF ubiquitin ligase and regulates hypocotyl elongation

Mol Plant. 2013 Sep;6(5):1616-29. doi: 10.1093/mp/sst045. Epub 2013 Mar 9.

Abstract

The regulation of protein turnover by the ubiquitin proteasome system (UPS) is a major posttranslational mechanism in eukaryotes. One of the key components of the UPS, the COP9 signalosome (CSN), regulates 'cullin-ring' E3 ubiquitin ligases. In plants, CSN participates in diverse cellular and developmental processes, ranging from light signaling to cell cycle control. In this work, we isolated a new plant-specific CSN-interacting F-box protein, which we denominated CFK1 (COP9 INTERACTING F-BOX KELCH 1). We show that, in Arabidopsis thaliana, CFK1 is a component of a functional ubiquitin ligase complex. We also show that CFK1 stability is regulated by CSN and by proteasome-dependent proteolysis, and that light induces accumulation of the CFK1 transcript in the hypocotyl. Analysis of CFK1 knockdown, mutant, and overexpressing seedlings indicates that CFK1 promotes hypocotyl elongation by increasing cell size. Reduction of CSN levels enhances the short hypocotyl phenotype of CFK1-depleted seedlings, while complete loss of CSN activity suppresses the long-hypocotyl phenotype of CFK1-overexpressing seedlings. We propose that CFK1 (and its regulation by CSN) is a novel component of the cellular mechanisms controlling hypocotyl elongation.

Keywords: Arabidopsis thaliana; COP9 signalosome; F-box protein; hypocotyl elongation; proteasome; seedling development.; ubiquitin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Arabidopsis / cytology
  • Arabidopsis / enzymology*
  • Arabidopsis / growth & development*
  • Arabidopsis / radiation effects
  • Arabidopsis Proteins / chemistry
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • COP9 Signalosome Complex
  • Cell Size / radiation effects
  • Down-Regulation / radiation effects
  • F-Box Proteins / chemistry
  • F-Box Proteins / genetics
  • F-Box Proteins / metabolism*
  • Gene Expression Regulation, Plant / radiation effects
  • Genes, Plant / genetics
  • Hypocotyl / genetics
  • Hypocotyl / growth & development*
  • Hypocotyl / radiation effects
  • Light
  • Molecular Sequence Data
  • Multiprotein Complexes / metabolism
  • Mutation / genetics
  • Peptide Hydrolases / metabolism
  • Phenotype
  • Plants, Genetically Modified
  • Proteasome Endopeptidase Complex / metabolism
  • Protein Stability / radiation effects
  • Proteolysis / radiation effects
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • SKP Cullin F-Box Protein Ligases / chemistry
  • SKP Cullin F-Box Protein Ligases / genetics
  • SKP Cullin F-Box Protein Ligases / metabolism*
  • Ubiquitination / radiation effects

Substances

  • Arabidopsis Proteins
  • CFK1 protein, Arabidopsis
  • F-Box Proteins
  • Multiprotein Complexes
  • RNA, Messenger
  • SKP Cullin F-Box Protein Ligases
  • Peptide Hydrolases
  • COP9 Signalosome Complex
  • Proteasome Endopeptidase Complex