Five-membered iminocyclitol α-glucosidase inhibitors: synthetic, biological screening and in silico studies

Bioorg Med Chem. 2013 Apr 1;21(7):1911-7. doi: 10.1016/j.bmc.2013.01.030. Epub 2013 Jan 26.

Abstract

The design and synthesis of a small library of pyrrolidine iminocyclitol inhibitors with a structural similarity to 1,4-dideoxy-1,4-imino-D-arabitol (DAB-1) is reported. This library was specifically designed to gain a better insight into the mechanism of inhibition of glycosidases by polyhydroxylated pyrrolidines or iminocyclitols. Pyrrolidine-3,4-diol 15a and pyrrolidine-3,4-diol diacetate 15b had emerged as the most potent α-glucosidase inhibitors in the series. Docking studies performed with an homology model of α-glucosidase disclosed binding poses for compounds 15a, 15b, 16a, and 16a' occupying the same region as the NH group of the terminal ring of acarbose and suggest a closer and stronger binding of compound 15a and 15b with the enzyme active site residues. Our studies indicate that 2 or 5-hydroxyl substituents appear to be vital for high inhibitory activity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cyclitols / chemical synthesis
  • Cyclitols / chemistry*
  • Cyclitols / pharmacology*
  • Enzyme Inhibitors / chemical synthesis
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / pharmacology
  • Glycoside Hydrolase Inhibitors*
  • Molecular Docking Simulation
  • Protein Binding
  • Pyrrolidines / chemical synthesis
  • Pyrrolidines / chemistry*
  • Pyrrolidines / pharmacology*
  • Saccharomyces cerevisiae / chemistry
  • Saccharomyces cerevisiae / drug effects
  • Saccharomyces cerevisiae / enzymology*
  • alpha-Glucosidases / chemistry
  • alpha-Glucosidases / metabolism

Substances

  • Cyclitols
  • Enzyme Inhibitors
  • Glycoside Hydrolase Inhibitors
  • Pyrrolidines
  • alpha-Glucosidases