Characterization of the metabolic pathway involved in assimilation of acenaphthene in Acinetobacter sp. strain AGAT-W

Res Microbiol. 2013 Feb-Mar;164(2):155-63. doi: 10.1016/j.resmic.2012.11.003. Epub 2012 Nov 23.

Abstract

Utilization of an enrichment technique led to isolation of a bacterium from municipal waste-contaminated soil in which acenaphthene was used as the sole source of carbon and energy. The isolate was identified as Acinetobacter sp. strain AGAT-W based on morphological, nutritional and biochemical characteristics and 16S rRNA sequence analysis. Characterization of metabolites by HPLC and GC-MS suggested hydroxylation of acenaphthene to 1-acenaphthenol, which was subsequently transformed to catechol via acenaphthenequinone, naphthalene-1,8-dicarboxylic acid, 1-naphthoic acid and salicylic acid before entering into the tricarboxylic acid cycle. Detection of key enzymes, viz., 1-acenaphthenol dehydrogenase, salicylaldehyde dehydrogenase and catechol 1,2-dioxygenase, in the cell-free extract of Acinetobacter sp. further supported the proposed degradation pathway. This study proposes a metabolic pathway involved in acenaphthene assimilation in strain AGAT-W.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acenaphthenes / metabolism*
  • Acinetobacter / classification
  • Acinetobacter / genetics*
  • Acinetobacter / isolation & purification
  • Acinetobacter / metabolism*
  • Biotransformation
  • Carbon / metabolism
  • Chromatography, High Pressure Liquid
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Energy Metabolism
  • Gas Chromatography-Mass Spectrometry
  • Metabolic Networks and Pathways*
  • Models, Biological
  • Molecular Sequence Data
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Soil Microbiology

Substances

  • Acenaphthenes
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Ribosomal, 16S
  • Carbon
  • acenaphthene

Associated data

  • GENBANK/JF834173