Cloning, identification and expression analysis of ACC oxidase gene involved in ethylene production pathway

Mol Biol Rep. 2013 Feb;40(2):1341-50. doi: 10.1007/s11033-012-2178-7. Epub 2012 Oct 18.

Abstract

1-aminocyclopropane-1-carboxylic acid oxidase (ACO) enzyme is a member of the Fe II-dependent family of oxidases/oxygenases which require Fe(2+) as a cofactor, ascorbate as a cosubstrate and CO(2) as an activator. This enzyme catalyses the terminal step in the plant signaling of ethylene biosynthetic pathway. A 948 bp fragment of the ACO1 gene cDNA sequence was cloned from tomato (Lycopersicon esculentum) fruit tissues by using reverse transcriptase-polymerase chain reaction (RT-PCR) with two PCR primers designed according to the sequence of a tomato cDNA clone (X58273). The BLAST search showed a high level of similarity (77-98 %) between ACO1 and ACO genes of other plants. The calculated molecular mass and predicted isoelectric point of LeACO1 were 35.8 kDa and 5.13, respectively. The three-dimensional structure studies illustrated that the LeACO1 protein folds into a compact jelly-roll motif comprised of 8 α-helices, 12 β-strands and several long loops. The cosubstrate was located in a cofactor-binding pocket referred to as a 2-His-1-carboxylate facial triad. Semi-quantitative RT-PCR analysis of gene expression revealed that the LeACO1 was expressed in fruit tissues at different ripening stages.

MeSH terms

  • Amino Acid Oxidoreductases / chemistry
  • Amino Acid Oxidoreductases / genetics*
  • Amino Acid Oxidoreductases / metabolism
  • Amino Acid Sequence
  • Base Sequence
  • Biosynthetic Pathways
  • Catalytic Domain
  • Ethylenes / biosynthesis*
  • Fruit / enzymology*
  • Fruit / genetics
  • Fruit / growth & development
  • Gene Expression
  • Gene Expression Regulation, Developmental
  • Gene Expression Regulation, Plant
  • Models, Molecular
  • Molecular Sequence Data
  • Phylogeny
  • Plant Proteins / chemistry
  • Plant Proteins / genetics*
  • Plant Proteins / metabolism
  • Protein Structure, Secondary
  • Sequence Analysis, DNA
  • Sequence Analysis, Protein
  • Sequence Homology, Amino Acid
  • Solanum lycopersicum / enzymology*
  • Solanum lycopersicum / genetics
  • Solanum lycopersicum / growth & development
  • Structural Homology, Protein

Substances

  • Ethylenes
  • Plant Proteins
  • ethylene
  • Amino Acid Oxidoreductases
  • 1-aminocyclopropane-1-carboxylic acid oxidase