Molecular characterization of artemisia virus A, a new sobemovirus isolated from Artemisia annua

Arch Virol. 2013 Feb;158(2):463-6. doi: 10.1007/s00705-012-1507-4. Epub 2012 Oct 10.

Abstract

A distinct sobemovirus was isolated from diseased Artemisia annua plants grown in experimental culture plots in Switzerland. Electron microscopy performed on extracts of leaf and root samples of a diseased A. annua plant revealed icosahedral-30 nm viral particles. The complete nucleotide sequence of the viral genome was determined. The single positive-strand RNA of 4138 nt encodes four open reading frames with an organization similar to that described for sobemoviruses. Phylogenetic analysis revealed a close relationship to ryegrass mottle virus. The virus was efficiently acquired by healthy A. annua from contaminated soil samples. "Artemisia virus A" is tentatively proposed as a name for this new candidate member of the unassigned genus Sobemovirus.

MeSH terms

  • Artemisia annua / virology*
  • Cluster Analysis
  • Genome, Viral*
  • Microscopy, Electron, Transmission
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Plant Diseases / virology
  • Plant Leaves / virology
  • Plant Roots / virology
  • Plant Viruses / classification*
  • Plant Viruses / genetics
  • Plant Viruses / isolation & purification*
  • RNA Viruses / classification*
  • RNA Viruses / genetics
  • RNA Viruses / isolation & purification*
  • RNA, Viral / genetics*
  • Sequence Analysis, DNA
  • Switzerland
  • Virion / ultrastructure

Substances

  • RNA, Viral

Associated data

  • GENBANK/JN620802
  • RefSeq/NC_017914