Acinetobacter baumannii FolD ligand complexes --potent inhibitors of folate metabolism and a re-evaluation of the structure of LY374571

FEBS J. 2012 Dec;279(23):4350-60. doi: 10.1111/febs.12025. Epub 2012 Nov 5.

Abstract

The bifunctional N(5),N(10)-methylenetetrahydrofolate dehydrogenase/cyclohydrolase (DHCH or FolD), which is widely distributed in prokaryotes and eukaryotes, is involved in the biosynthesis of folate cofactors that are essential for growth and cellular development. The enzyme activities represent a potential antimicrobial drug target. We have characterized the kinetic properties of FolD from the Gram-negative pathogen Acinetobacter baumanni and determined high-resolution crystal structures of complexes with a cofactor and two potent inhibitors. The data reveal new details with respect to the molecular basis of catalysis and potent inhibition. A unexpected finding was that our crystallographic data revealed a different structure for LY374571 (an inhibitor studied as an antifolate) than that previously published. The implications of this observation are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acinetobacter baumannii / enzymology*
  • Acinetobacter baumannii / metabolism*
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism*
  • Crystallography, X-Ray
  • Folic Acid / chemistry
  • Folic Acid / metabolism*
  • Kinetics
  • Methylenetetrahydrofolate Dehydrogenase (NADP) / chemistry
  • Methylenetetrahydrofolate Dehydrogenase (NADP) / metabolism*
  • Protein Structure, Secondary

Substances

  • Bacterial Proteins
  • Folic Acid
  • Methylenetetrahydrofolate Dehydrogenase (NADP)

Associated data

  • PDB/4B4U
  • PDB/4B4V
  • PDB/4B4W