Algibacter aquimarinus sp. nov., isolated from a marine environment, and reclassification of Pontirhabdus pectinivorans as Algibacter pectinivorans comb. nov

Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):2038-2042. doi: 10.1099/ijs.0.045815-0. Epub 2012 Oct 5.

Abstract

An orange-coloured, rod-shaped, Gram-reaction-negative and aerobic bacterial strain, designated KYW589(T), was isolated from seawater collected from Gwangyang Bay, Republic of Korea. The isolate required sea salts for growth. Gliding motility was observed. Flexirubin-type pigments were absent. Major cellular fatty acids (>10% of the total) were iso-C15:0, iso-C17:0 3-OH, iso-C15:1 G, C16:0, iso-C15:0 3-OH and C18:0. The main polar lipids were phosphatidylethanolamine, two unidentified aminolipids and two unidentified lipids. The predominant isoprenoid quinone was MK-6. The DNA G+C content was 38.6 ± 0.7 mol% (mean ± sd of three determinations). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain KYW589(T) belongs to the family Flavobacteriaceae, and was related to the genus Algibacter. Based on data from a study using a polyphasic taxonomic approach, it is proposed that strain KYW589(T) represents a novel species belonging to the genus Algibacter, for which the name Algibacter aquimarinus sp. nov. is proposed. The type strain is KYW589(T) (=KCTC 23928(T) =JCM 18287(T)). Reclassification of Pontirhabdus pectinivorans Yi et al. 2011 to the genus Algibacter, as Algibacter pectinivorans comb. nov. (type strain JC2675(T) =KACC 14153(T) =JCM 17107(T)), is also proposed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Molecular Sequence Data
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / analysis
  • Water Microbiology

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 6

Associated data

  • GENBANK/JQ259859