A low-temperature-active alkaline pectate lyase from Xanthomonas campestris ACCC 10048 with high activity over a wide pH range

Appl Biochem Biotechnol. 2012 Nov;168(6):1489-500. doi: 10.1007/s12010-012-9872-8. Epub 2012 Sep 15.

Abstract

Alkaline pectate lyases are favorable for the textile industry. Here, we report the gene cloning and expression of a low-temperature-active alkaline pectate lyase (PL D) from Xanthomonas campestris ACCC 10048. Deduced PL D consists of a putative 27-residue signal peptide and a catalytic domain of 320 residues belonging to family PF09492. Recombinant PL D (r-PL D) produced in Escherichia coli was purified to electrophoretic homogeneity with a single step of Ni(2+)-NTA affinity chromatography and showed an apparent molecular weight of ~38 kDa. The pH and temperature optima of r-PL D were found to be 9.0 °C and 30 °C, respectively. Compared with its microbial counterparts, r-PL D had higher activity over a wide pH range (>45 % of the maximum activity at pH 3.0-12.0) and at lower temperatures (>35 % of activity even at 0 °C). The K(m) and V(max) values of r-PL D for polygalacturonic acid were 4.9 gl(-1) and 30.1 μmolmin(-1) mg(-1), respectively. Compared with the commercial compound pectinase from Novozymes, r-PL D showed similar efficacy in reducing the intrinsic viscosity of polygalacturonic acid (35.1 % vs. 36.5 %) and in bioscouring of jute (10.25 % vs. 10.82 %). Thus, r-PL D is a valuable additive candidate for the textile industry.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Cold Temperature
  • Enzyme Stability
  • Hydrogen-Ion Concentration
  • Kinetics
  • Polysaccharide-Lyases / chemistry*
  • Polysaccharide-Lyases / genetics
  • Polysaccharide-Lyases / metabolism
  • Substrate Specificity
  • Temperature
  • Xanthomonas campestris / chemistry
  • Xanthomonas campestris / enzymology*
  • Xanthomonas campestris / genetics

Substances

  • Bacterial Proteins
  • Polysaccharide-Lyases
  • pectate lyase