Nuclear LSm8 affects number of cytoplasmic processing bodies via controlling cellular distribution of Like-Sm proteins

Mol Biol Cell. 2012 Oct;23(19):3776-85. doi: 10.1091/mbc.E12-02-0085. Epub 2012 Aug 8.

Abstract

Processing bodies (P-bodies) are dynamic cytoplasmic structures involved in mRNA degradation, but the mechanism that governs their formation is poorly understood. In this paper, we address a role of Like-Sm (LSm) proteins in formation of P-bodies and provide evidence that depletion of nuclear LSm8 increases the number of P-bodies, while LSm8 overexpression leads to P-body loss. We show that LSm8 knockdown causes relocalization of LSm4 and LSm6 proteins to the cytoplasm and suggest that LSm8 controls nuclear accumulation of all LSm2-7 proteins. We propose a model in which redistribution of LSm2-7 to the cytoplasm creates new binding sites for other P-body components and nucleates new, microscopically visible structures. The model is supported by prolonged residence of two P-body proteins, DDX6 and Ago2, in P-bodies after LSm8 depletion, which indicates stronger interactions between these proteins and P-bodies. Finally, an increased number of P-bodies has negligible effects on microRNA-mediated translation repression and nonsense mediated decay, further supporting the view that the function of proteins localized in P-bodies is independent of visible P-bodies.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Autoantigens / metabolism
  • Cell Nucleus / metabolism*
  • Cytoplasmic Granules / metabolism*
  • DEAD-box RNA Helicases / metabolism
  • Humans
  • Microscopy, Fluorescence
  • N-Terminal Acetyltransferase C / metabolism
  • N-Terminal Acetyltransferase C / physiology*
  • Protein Transport
  • Proto-Oncogene Proteins / metabolism
  • RNA Processing, Post-Transcriptional*
  • RNA-Binding Proteins / metabolism
  • Recombinant Fusion Proteins / metabolism
  • Ribonucleoprotein, U4-U6 Small Nuclear / metabolism
  • Ribonucleoprotein, U4-U6 Small Nuclear / physiology*
  • Ribonucleoproteins, Small Nuclear / metabolism

Substances

  • Autoantigens
  • NAA38 protein, human
  • Proto-Oncogene Proteins
  • RNA-Binding Proteins
  • Recombinant Fusion Proteins
  • Ribonucleoprotein, U4-U6 Small Nuclear
  • Ribonucleoproteins, Small Nuclear
  • TNRC6A protein, human
  • N-Terminal Acetyltransferase C
  • DDX6 protein, human
  • DEAD-box RNA Helicases