Precursor directed biosynthesis of an orthogonally functional erythromycin analogue: selectivity in the ribosome macrolide binding pocket

J Am Chem Soc. 2012 Jul 25;134(29):12259-65. doi: 10.1021/ja304682q. Epub 2012 Jul 11.

Abstract

The macrolide antibiotic erythromycin A and its semisynthetic analogues have been among the most useful antibacterial agents for the treatment of infectious diseases. Using a recently developed chemical genetic strategy for precursor-directed biosynthesis and colony bioassay of 6-deoxyerythromycin D analogues, we identified a new class of alkynyl- and alkenyl-substituted macrolides with activities comparable to that of the natural product. Further analysis revealed a marked and unexpected dependence of antibiotic activity on the size and degree of unsaturation of the precursor. Based on these leads, we also report the precursor-directed biosynthesis of 15-propargyl erythromycin A, a novel antibiotic that not only is as potent as erythromycin A with respect to its ability to inhibit bacterial growth and cell-free ribosomal protein biosynthesis but also harbors an orthogonal functional group that is capable of facile chemical modification.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemistry*
  • Anti-Bacterial Agents / metabolism*
  • Anti-Bacterial Agents / pharmacology
  • Bacillus subtilis / drug effects
  • Binding Sites
  • Erythromycin / chemistry*
  • Erythromycin / metabolism*
  • Erythromycin / pharmacology
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Industrial Microbiology / methods
  • Models, Molecular
  • Ribosomes / chemistry
  • Ribosomes / metabolism*

Substances

  • Anti-Bacterial Agents
  • Erythromycin