The potential for respiratory droplet-transmissible A/H5N1 influenza virus to evolve in a mammalian host

Science. 2012 Jun 22;336(6088):1541-7. doi: 10.1126/science.1222526.

Abstract

Avian A/H5N1 influenza viruses pose a pandemic threat. As few as five amino acid substitutions, or four with reassortment, might be sufficient for mammal-to-mammal transmission through respiratory droplets. From surveillance data, we found that two of these substitutions are common in A/H5N1 viruses, and thus, some viruses might require only three additional substitutions to become transmissible via respiratory droplets between mammals. We used a mathematical model of within-host virus evolution to study factors that could increase and decrease the probability of the remaining substitutions evolving after the virus has infected a mammalian host. These factors, combined with the presence of some of these substitutions in circulating strains, make a virus evolving in nature a potentially serious threat. These results highlight critical areas in which more data are needed for assessing, and potentially averting, this threat.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptation, Physiological
  • Air Microbiology
  • Amino Acid Substitution
  • Animals
  • Birds
  • Evolution, Molecular*
  • Genetic Fitness
  • Glycosylation
  • Hemagglutinin Glycoproteins, Influenza Virus / genetics*
  • Hemagglutinin Glycoproteins, Influenza Virus / metabolism
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Influenza A Virus, H5N1 Subtype / genetics*
  • Influenza A Virus, H5N1 Subtype / pathogenicity*
  • Influenza in Birds / virology
  • Influenza, Human / immunology
  • Influenza, Human / transmission
  • Influenza, Human / virology*
  • Mammals
  • Models, Biological
  • Mutation
  • Orthomyxoviridae Infections / transmission
  • Orthomyxoviridae Infections / virology*
  • Probability
  • RNA-Dependent RNA Polymerase / genetics*
  • Receptors, Virus / metabolism
  • Respiratory System / virology*
  • Selection, Genetic
  • Sialic Acids / metabolism
  • Viral Proteins / genetics*

Substances

  • Hemagglutinin Glycoproteins, Influenza Virus
  • PB2 protein, Influenzavirus A
  • Receptors, Virus
  • Sialic Acids
  • Viral Proteins
  • hemagglutinin, avian influenza A virus
  • RNA-Dependent RNA Polymerase