Synthesis, 5-hydroxytryptamine1A receptor affinity and docking studies of 3-[3-(4-aryl-1-piperazinyl)-propyl]-1H-indole derivatives

Chem Pharm Bull (Tokyo). 2012;60(5):632-8. doi: 10.1248/cpb.60.632.

Abstract

A series of 3-[3-(4-aryl-1-piperazinyl)-propyl]-1H-indole derivatives (12a-h) was synthesized and evaluated for binding affinity at the human 5-hydroxytryptamine(1A) receptor (5-HT(1A)R) compounds (12b) and (12h) showed the highest 5-HT(1A) receptor affinity (IC(50)=15 nM). Molecular docking studies with all the compounds in a homology model of 5-HT(1A) showed that the main interaction anchoring the ligand in the receptor was a charge-reinforced bond between the protonated nitrogen atom (N-4) of the piperazine ring and Aspartate(3.32).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aspartic Acid / chemistry
  • Binding Sites
  • Computer Simulation
  • Humans
  • Indoles / chemical synthesis
  • Indoles / chemistry*
  • Piperazine
  • Piperazines / chemistry*
  • Protein Structure, Tertiary
  • Receptor, Serotonin, 5-HT1A / chemistry*
  • Receptor, Serotonin, 5-HT1A / metabolism
  • Structure-Activity Relationship

Substances

  • Indoles
  • Piperazines
  • Receptor, Serotonin, 5-HT1A
  • Piperazine
  • Aspartic Acid