Buckwheat trypsin inhibitor with helical hairpin structure belongs to a new family of plant defence peptides

Biochem J. 2012 Aug 15;446(1):69-77. doi: 10.1042/BJ20120548.

Abstract

A new peptide trypsin inhibitor named BWI-2c was obtained from buckwheat (Fagopyrum esculentum) seeds by sequential affinity, ion exchange and reversed-phase chromatography. The peptide was sequenced and found to contain 41 amino acid residues, with four cysteine residues involved in two intramolecular disulfide bonds. Recombinant BWI-2c identical to the natural peptide was produced in Escherichia coli in a form of a cleavable fusion with thioredoxin. The 3D (three-dimensional) structure of the peptide in solution was determined by NMR spectroscopy, revealing two antiparallel α-helices stapled by disulfide bonds. Together with VhTI, a trypsin inhibitor from veronica (Veronica hederifolia), BWI-2c represents a new family of protease inhibitors with an unusual α-helical hairpin fold. The linker sequence between the helices represents the so-called trypsin inhibitory loop responsible for direct binding to the active site of the enzyme that cleaves BWI-2c at the functionally important residue Arg(19). The inhibition constant was determined for BWI-2c against trypsin (1.7×10(-1)0 M), and the peptide was tested on other enzymes, including those from various insect digestive systems, revealing high selectivity to trypsin-like proteases. Structural similarity shared by BWI-2c, VhTI and several other plant defence peptides leads to the acknowledgement of a new widespread family of plant peptides termed α-hairpinins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Chromatography, Reverse-Phase
  • Fagopyrum / chemistry*
  • Fagopyrum / physiology
  • Magnetic Resonance Spectroscopy
  • Molecular Sequence Data
  • Peptides / chemistry*
  • Peptides / genetics
  • Peptides / metabolism
  • Plant Proteins / chemistry*
  • Plant Proteins / genetics
  • Plant Proteins / metabolism
  • Protein Conformation
  • Protein Folding
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Seeds / chemistry
  • Trypsin Inhibitors / chemistry*
  • Trypsin Inhibitors / isolation & purification

Substances

  • Peptides
  • Plant Proteins
  • Recombinant Proteins
  • Trypsin Inhibitors

Associated data

  • PDB/2LQX