Bacterial amyloids

Methods Mol Biol. 2012:849:303-20. doi: 10.1007/978-1-61779-551-0_21.

Abstract

Many bacteria can assemble functional amyloid fibers on their cell surface. The majority of bacterial amyloids contribute to biofilm or other community behaviors where cells interact with a surface or with another cell. Bacterial amyloids, like all functional amyloids, share structural and biochemical properties with disease-associated eukaryotic amyloids. The general ability of amyloids to bind amyloid-specific dyes, such as Congo red, and their resistance to denaturation have provided useful tools for scoring and quantifying bacterial amyloid formation. Here, we present basic approaches to study bacterial amyloids by focusing on the well-studied curli amyloid fibers expressed by Enterobacteriaceae. These methods exploit the specific tinctorial and biophysical properties of amyloids. The methods described here are straightforward and can be easily applied by any modern molecular biology lab for the study of other bacterial amyloids.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Amyloid / chemistry*
  • Amyloid / genetics
  • Amyloid / metabolism
  • Blotting, Western
  • Congo Red / metabolism
  • Escherichia coli / cytology*
  • Escherichia coli / metabolism
  • Escherichia coli Proteins / chemistry*
  • Escherichia coli Proteins / genetics
  • Escherichia coli Proteins / metabolism
  • Formates / pharmacology
  • Mutation
  • Propanols / pharmacology
  • Protein Multimerization / drug effects
  • Protein Structure, Secondary
  • Protein Structure, Tertiary

Substances

  • Amyloid
  • Escherichia coli Proteins
  • Formates
  • Propanols
  • csgA protein, E coli
  • formic acid
  • hexafluoroisopropanol
  • Congo Red