Vibrio inhibens sp. nov., a novel bacterium with inhibitory activity against Vibrio species

J Antibiot (Tokyo). 2012 Jun;65(6):301-5. doi: 10.1038/ja.2012.22. Epub 2012 Apr 4.

Abstract

Strain BFLP-10(T), isolated from faeces of wild long-snouted seahorses (Hippocampus guttulatus), is a Gram-negative, motile and facultatively anaerobic rod. This bacterium produces inhibitory activity against Vibrio species. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BFLP-10(T) was a member of the genus Vibrio and was most closely related to Vibrio owensii (99%), Vibrio communis (98.9%), Vibrio sagamiensis (98.9%) and Vibrio rotiferianus (98.4%). However, multilocus sequence analysis using gyrB, pyrH, recA and topA genes revealed low levels of sequence similarity (<91.2%) with these closely related species. In addition, strain BFLP-10(T) could be readily differentiated from other closely related species by several phenotypic properties and fatty acid profiles. The G+C content of the DNA was 45.6 mol%. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain BFLP-10(T) represents a novel species within the genus Vibrio, for which the name Vibrio inhibens sp. nov. is proposed. The type strain is BFLP-10(T) (=CECT 7692(T)=DSM 23440(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • DNA Gyrase / chemistry
  • DNA Gyrase / genetics
  • DNA Topoisomerases, Type I / chemistry
  • DNA Topoisomerases, Type I / genetics
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Microbial Sensitivity Tests
  • Molecular Sequence Data
  • Nucleoside-Phosphate Kinase / chemistry
  • Nucleoside-Phosphate Kinase / genetics
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA, Ribosomal, 16S / chemistry
  • RNA, Ribosomal, 16S / genetics
  • Rec A Recombinases / chemistry
  • Rec A Recombinases / genetics
  • Sequence Alignment
  • Smegmamorpha / microbiology*
  • Vibrio / classification*
  • Vibrio / genetics
  • Vibrio / isolation & purification
  • Vibrio / ultrastructure

Substances

  • DNA, Bacterial
  • Fatty Acids
  • RNA, Ribosomal, 16S
  • uridine monophosphate kinase
  • Nucleoside-Phosphate Kinase
  • Rec A Recombinases
  • DNA Topoisomerases, Type I
  • DNA Gyrase

Associated data

  • GENBANK/FN687911
  • GENBANK/FR669655
  • GENBANK/HE588134
  • GENBANK/HE588135
  • GENBANK/HE588136