Structure of a bacterial cytoplasmic cyclophilin A in complex with a tetrapeptide

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Mar 1;68(Pt 3):259-64. doi: 10.1107/S1744309112000188. Epub 2012 Feb 15.

Abstract

Cyclophilins constitute a class of peptidyl-prolyl isomerases which participate in processes related to protein folding, signalling and chaperoning. The crystal structure of the cytoplasmic cyclophilin A (CyPA) from the bacterium Azotobacter vinelandii complexed with a synthetic tetrapeptide was determined by molecular replacement at 2 resolution. The proline in the tetrapeptide is observed to adopt the cis-isomer conformation. Comparisons of this structure with other CyPA structures provide insights into the conformational variability, effects of peptide binding and structure-function relationships of this enzyme.

MeSH terms

  • Amino Acid Sequence
  • Azotobacter vinelandii / enzymology*
  • Cyclophilin A / chemistry*
  • Cytoplasm / chemistry
  • Humans
  • Hydrogen Bonding
  • Models, Molecular
  • Molecular Sequence Data
  • Peptides / chemistry*
  • Protein Interaction Domains and Motifs
  • Sequence Alignment

Substances

  • Peptides
  • Cyclophilin A

Associated data

  • PDB/3T1U