Fast transcription rates of RNA polymerase II in human cells

EMBO Rep. 2011 Dec 1;12(12):1280-5. doi: 10.1038/embor.2011.196.

Abstract

Averaged estimates of RNA polymerase II (RNAPII) elongation rates in mammalian cells have been shown to range between 1.3 and 4.3 kb min(-1). In this work, nascent RNAs from an integrated human immunodeficiency virus type 1-derived vector were detectable at the single living cell level by fluorescent RNA tagging. At steady state, a constant number of RNAs was measured corresponding to a minimal density of polymerases with negligible fluctuations over time. Recovery of fluorescence after photobleaching was complete within seconds, indicating a high rate of RNA biogenesis. The calculated transcription rate above 50 kb min(-1) points towards a wide dynamic range of RNAPII velocities in living cells.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Line
  • Cell Survival
  • Fluorescence Recovery After Photobleaching
  • Gene Expression Regulation
  • Humans
  • In Situ Hybridization
  • RNA Polymerase II / genetics*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • Retroviridae / genetics
  • Transcription, Genetic*

Substances

  • RNA, Messenger
  • RNA Polymerase II