Description of Xenorhabdus magdalenensis sp. nov., the symbiotic bacterium associated with Steinernema australe

Int J Syst Evol Microbiol. 2012 Aug;62(Pt 8):1761-1765. doi: 10.1099/ijs.0.034322-0. Epub 2011 Sep 23.

Abstract

A symbiotic bacterium, strain IMI 397775(T), was isolated from the insect-pathogenic nematode Steinernema australe. On the basis of 16S rRNA gene sequence similarity, this bacterial isolate was shown to belong to the genus Xenorhabdus, in agreement with the genus of its nematode host. The accurate phylogenetic position of this new isolate was defined using a multigene approach and showed that isolate IMI 397775(T) shares a common ancestor with Xenorhabdus doucetiae FRM16(T) and Xenorhabdus romanii PR06-A(T), the symbiotic bacteria associated with Steinernema diaprepesi and Steinernema puertoricense, respectively. The nucleotide identity (less than 97%) between isolate IMI 397775(T), X. doucetiae FRM16(T) and X. romanii PR06-A(T) calculated for the concatenated sequences of five gene fragments encompassing 4275 nt, several phenotypic traits and the difference between the upper temperatures that limit growth of these three bacteria allowed genetic and phenotypic differentiation of isolate IMI 397775(T) from the two closely related species. Strain IMI 397775(T) therefore represents a novel species, for which the name Xenorhabdus magdalenensis sp. nov. is proposed, with the type strain IMI 397775(T) ( = DSM 24915(T)).

MeSH terms

  • Animals
  • Bacterial Typing Techniques
  • DNA, Bacterial / genetics
  • Molecular Sequence Data
  • Phenotype
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Rhabditida / microbiology*
  • Sequence Analysis, DNA
  • Symbiosis
  • Xenorhabdus / classification*
  • Xenorhabdus / genetics
  • Xenorhabdus / isolation & purification

Substances

  • DNA, Bacterial
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/HQ877464
  • GENBANK/JF798399
  • GENBANK/JF798400
  • GENBANK/JF798401
  • GENBANK/JF798402
  • GENBANK/JF798403