Characterization of nuclear microsatellite loci in the calcareous fen specialist Scorpidium cossonii (Calliergonaceae)

Am J Bot. 2011 Oct;98(10):e290-2. doi: 10.3732/ajb.1100144. Epub 2011 Sep 16.

Abstract

Premise of the study: Nuclear microsatellite markers were developed in the fen specialist moss, Scorpidium cossonii, to study genetic diversity and genetic structure of this species in relation to land-use types, habitat fragmentation, and habitat conservation measures.

Methods and results: The polymorphisms of 14 microsatellite markers were characterized. All primers were tested on 140 gametophytes collected from four populations in Switzerland. The primers amplified di- and trinucleotide repeats with three to 26 alleles per locus. The primers worked also in the two other species of the genus: 14 and 12 primers successfully amplified in S. revolvens and S. scorpioides, respectively.

Conclusions: In future studies, our primers have the potential to provide valuable information on genetic diversity, genetic structure, and on historical and recent gene flow in S. cossonii; they should also enable related research in other Scorpidium species.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Bryopsida / genetics*
  • Cell Nucleus / genetics*
  • Genetic Loci / genetics*
  • Genetic Testing
  • Genetics, Population
  • Microsatellite Repeats / genetics*
  • Molecular Sequence Data

Associated data

  • GENBANK/JF700218
  • GENBANK/JF700219
  • GENBANK/JF700220
  • GENBANK/JF700221
  • GENBANK/JF700222
  • GENBANK/JF700223
  • GENBANK/JF700224
  • GENBANK/JF700225
  • GENBANK/JF700226
  • GENBANK/JF700227
  • GENBANK/JF700228
  • GENBANK/JF700229
  • GENBANK/JF700230
  • GENBANK/JF700231