Methylobacterium oxalidis sp. nov., isolated from leaves of Oxalis corniculata

Int J Syst Evol Microbiol. 2012 Jul;62(Pt 7):1647-1652. doi: 10.1099/ijs.0.033019-0. Epub 2011 Sep 9.

Abstract

A pink-pigmented, facultatively methylotrophic bacterium, strain 35a(T), was isolated from the leaves of Oxalis corniculata. Cells of strain 35a(T) were Gram-reaction-negative, motile, non-spore-forming rods. The highest 16S rRNA gene pairwise sequence similarities for strain 35a(T) were found with the strains of Methylobacterium iners 5317S-33(T) (96.7%), 'Methylobacterium soli' YIM 48816 (96.6%) and Methylobacterium jeotgali S2R03-9(T) (96.3%). 16S rRNA gene sequence similarities with the type strains of all other recognized species of the genus Methylobacterium were below 96%. Major cellular fatty acids were C(18:1)ω7c, C(18:0) and C(16:0). The results of DNA-DNA hybridization experiments, analysis of cpn60 gene sequences, fatty acid profiles, whole-cell MALDI-TOF/MS spectral pattern analysis, and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain 35a(T) from its nearest phylogenetic neighbours. Strain 35a(T) is therefore considered to represent a novel species within the genus Methylobacterium, for which the name Methylobacterium oxalidis sp. nov. is proposed. The type strain is 35a(T) (=DSM 24028(T)=NBRC 107715(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Typing Techniques
  • Cluster Analysis
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / genetics
  • Fatty Acids / analysis
  • Ferns / microbiology*
  • Locomotion
  • Methylobacterium / classification*
  • Methylobacterium / genetics
  • Methylobacterium / isolation & purification*
  • Methylobacterium / physiology
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny
  • Pigments, Biological / metabolism
  • Plant Leaves / microbiology
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Pigments, Biological
  • RNA, Ribosomal, 16S

Associated data

  • GENBANK/AB607858
  • GENBANK/AB607859
  • GENBANK/AB607860
  • GENBANK/AB608730
  • GENBANK/AB640729