Genetic alterations in microRNAs in medulloblastomas

Brain Pathol. 2012 Mar;22(2):230-9. doi: 10.1111/j.1750-3639.2011.00523.x. Epub 2011 Sep 15.

Abstract

MicroRNAs (miRNAs) regulate a variety of cellular processes via the regulation of multiple target genes. We screened 48 medulloblastomas for mutation, deletion and amplification of nine miRNA genes that were selected on the basis of the presence of potential target sequences within the 3'-untranslated region of the MYCC mRNA. Differential PCR revealed deletions in miR-186 (15%), miR-135a-1 (33%), miR-548d-1 (42%), miR-548d-2 (21%) and miR-512-2 (33%) genes, whereas deletion or amplification was detected in miR-135b (23%) and miR-135a-2 (15%). In miR-33b, deletion, amplification or a mutation at the precursor miRNA were detected in 10% of medulloblastomas. Overall, 35/48 (73%) medulloblastomas had at least one alteration. Real-time RT-PCR revealed MYCC overexpression in 11 of 37 (30%) medulloblastomas, and there was a correlation between MYCC overexpression and miR-512-2 gene deletion (P = 0.0084). Antisense-based knockdown of miR-512-5p (mature sequence of miR-512-2) resulted in significant upregulation of MYCC expression in HeLa and A549 cells, while forced overexpression of miR-512-2 in medulloblastoma/PNET cell lines DAOY, UW-228-2, PFSK resulted in the downregulation of MYCC protein. Furthermore, the results of luciferase reporter assays suggested that miR-512-2 targets the MYCC gene. These results suggest that alterations in the miRNA genes may be an alternative mechanism leading to MYCC overexpression in medulloblastomas.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Cerebellar Neoplasms / genetics*
  • Child
  • Child, Preschool
  • Female
  • Gene Amplification / genetics
  • Gene Deletion
  • Gene Expression Regulation, Neoplastic / genetics*
  • Genetic Predisposition to Disease / genetics*
  • Genetic Testing
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Infant
  • Lung Neoplasms
  • Male
  • Medulloblastoma / genetics*
  • MicroRNAs / genetics*
  • Middle Aged
  • Mutation / genetics
  • Proto-Oncogene Proteins c-myc / genetics
  • Young Adult

Substances

  • MYC protein, human
  • MicroRNAs
  • Proto-Oncogene Proteins c-myc