In situ structural characterization of a recombinant protein in native Escherichia coli membranes with solid-state magic-angle-spinning NMR

J Am Chem Soc. 2011 Aug 17;133(32):12370-3. doi: 10.1021/ja204062v. Epub 2011 Jul 26.

Abstract

The feasibility of using solid-state magic-angle-spinning NMR spectroscopy for in situ structural characterization of the LR11 (sorLA) transmembrane domain (TM) in native Escherichia coli membranes is presented. LR11 interacts with the human amyloid precursor protein (APP), a central player in the pathology of Alzheimer's disease. The background signals from E. coli lipids and membrane proteins had only minor effects on the LR11 TM resonances. Approximately 50% of the LR11 TM residues were assigned by using (13)C PARIS data. These assignments allowed comparisons of the secondary structure of the LR11 TM in native membrane environments and commonly used membrane mimics (e.g., micelles). In situ spectroscopy bypasses several obstacles in the preparation of membrane proteins for structural analysis and offers the opportunity to investigate how membrane heterogeneity, bilayer asymmetry, chemical gradients, and macromolecular crowding affect the protein structure.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Escherichia coli / cytology*
  • Escherichia coli / genetics
  • Humans
  • LDL-Receptor Related Proteins / analysis*
  • LDL-Receptor Related Proteins / genetics
  • Membrane Transport Proteins / analysis*
  • Membrane Transport Proteins / genetics
  • Nuclear Magnetic Resonance, Biomolecular / methods*
  • Protein Conformation
  • Recombinant Fusion Proteins / analysis*
  • Recombinant Fusion Proteins / genetics

Substances

  • LDL-Receptor Related Proteins
  • Membrane Transport Proteins
  • Recombinant Fusion Proteins
  • SORL1 protein, human