concatenator: sequence data matrices handling made easy

F Pina-Martins; O S Paulo

doi:10.1111/j.1755-0998.2008.02164.x

concatenator: sequence data matrices handling made easy

Mol Ecol Resour. 2008 Nov;8(6):1254-5. doi: 10.1111/j.1755-0998.2008.02164.x.

Authors

F Pina-Martins¹, O S Paulo

Affiliation

¹ Centro de Biologia Ambiental, Departamento de Biologia Animal, Faculdade de Ciências da Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal.

PMID: 21586013
DOI: 10.1111/j.1755-0998.2008.02164.x

Abstract

concatenator is a simple and user-friendly software that implements two very useful functions for phylogenetics data analysis. It concatenates NEXUS files of several fragments in a single NEXUS file ready to be used in phylogenetics software, such as paup and mrbayes and it converts FASTA sequence data files to NEXUS and vice-versa. Additionally, concatenated files can be prepared for partition tests in paup. It is freely available in http://cobig2.fc.ul.pt.