The Leishmania donovani UMP synthase is essential for promastigote viability and has an unusual tetrameric structure that exhibits substrate-controlled oligomerization

J Biol Chem. 2011 Jun 10;286(23):20930-41. doi: 10.1074/jbc.M111.228213. Epub 2011 Apr 19.

Abstract

The final two steps of de novo uridine 5'-monophosphate (UMP) biosynthesis are catalyzed by orotate phosphoribosyltransferase (OPRT) and orotidine 5'-monophosphate decarboxylase (OMPDC). In most prokaryotes and simple eukaryotes these two enzymes are encoded by separate genes, whereas in mammals they are expressed as a bifunctional gene product called UMP synthase (UMPS), with OPRT at the N terminus and OMPDC at the C terminus. Leishmania and some closely related organisms also express a bifunctional enzyme for these two steps, but the domain order is reversed relative to mammalian UMPS. In this work we demonstrate that L. donovani UMPS (LdUMPS) is an essential enzyme in promastigotes and that it is sequestered in the parasite glycosome. We also present the crystal structure of the LdUMPS in complex with its product, UMP. This structure reveals an unusual tetramer with two head to head and two tail to tail interactions, resulting in two dimeric OMPDC and two dimeric OPRT functional domains. In addition, we provide structural and biochemical evidence that oligomerization of LdUMPS is controlled by product binding at the OPRT active site. We propose a model for the assembly of the catalytically relevant LdUMPS tetramer and discuss the implications for the structure of mammalian UMPS.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Leishmania donovani / enzymology*
  • Leishmania donovani / genetics
  • Models, Molecular*
  • Multienzyme Complexes / chemistry*
  • Multienzyme Complexes / genetics
  • Multienzyme Complexes / metabolism
  • Orotate Phosphoribosyltransferase / chemistry*
  • Orotate Phosphoribosyltransferase / genetics
  • Orotate Phosphoribosyltransferase / metabolism
  • Orotidine-5'-Phosphate Decarboxylase / chemistry*
  • Orotidine-5'-Phosphate Decarboxylase / genetics
  • Orotidine-5'-Phosphate Decarboxylase / metabolism
  • Protein Multimerization / physiology*
  • Protein Structure, Quaternary
  • Protein Structure, Tertiary
  • Protozoan Proteins / chemistry*
  • Protozoan Proteins / genetics
  • Protozoan Proteins / metabolism
  • Uridine Monophosphate / biosynthesis
  • Uridine Monophosphate / chemistry
  • Uridine Monophosphate / genetics

Substances

  • Multienzyme Complexes
  • Protozoan Proteins
  • uridine 5'-monophosphate synthase
  • Uridine Monophosphate
  • Orotate Phosphoribosyltransferase
  • Orotidine-5'-Phosphate Decarboxylase

Associated data

  • PDB/3QW3
  • PDB/3QW4