Species diversity of Trichoderma in Poland

J Appl Genet. 2011 May;52(2):233-43. doi: 10.1007/s13353-011-0039-z. Epub 2011 Apr 5.

Abstract

In the present study, we reinvestigate the diversity of Trichoderma in Poland utilizing a combination of morphological and molecular/phylogenetic methods. A total of 170 isolates were collected from six different substrata at 49 sites in Poland. These were divided among 14 taxa as follows: 110 of 170 Trichoderma isolates were identified to the species level by the analysis of their ITS1, ITS2 rDNA sequences as: T. harzianum (43 isolates), T. aggressivum (35), T. citrinoviride (11), T. hamatum (9), T. virens (6), T. longibrachiatum (4), T. polysporum (1), and T. tomentosum (1); 60 isolates belonging to the Viride clade were identified based on a fragment of the translation-elongation factor 1-alpha (tef1) gene as: T. atroviride (20 isolates), T. gamsii (2), T. koningii (17), T. viridescens (13), T. viride (7), and T. koningiopsis (1). Identifications were made using the BLAST interface in TrichOKEY and TrichoBLAST ( http://www.isth.info ). The most diverse substrata were soil (nine species per 22 isolates) and decaying wood (nine species per 75 isolates). The most abundant species (25%) isolated from all substrata was T. harzianum.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • DNA, Ribosomal / genetics
  • DNA, Ribosomal Spacer / genetics
  • Genetic Variation*
  • Molecular Sequence Data
  • Mycelium / genetics
  • Peptide Elongation Factor Tu / genetics
  • Phylogeny
  • Phylogeography
  • Poland
  • Sequence Analysis, DNA
  • Trichoderma / classification
  • Trichoderma / genetics*
  • Trichoderma / isolation & purification

Substances

  • DNA, Ribosomal
  • DNA, Ribosomal Spacer
  • Peptide Elongation Factor Tu

Associated data

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