Expression profile of human immune-responsive gene 1 and generation and characterization of polyclonal antiserum

Mol Cell Biochem. 2011 Jul;353(1-2):177-87. doi: 10.1007/s11010-011-0784-7. Epub 2011 Mar 20.

Abstract

Murine immune-responsive gene 1 (IRG1) plays significant roles in embryonic implantation and neurodegeneration. The expression pattern of the human IRG1 gene, however, has not yet been established, and the predicted gene sequence has been revised several times according to computed expressed sequence tags (ESTs). To determine the human IRG1 gene expression profile, human fetal tissue samples, peripheral blood mononuclear cells (PBMCs) from normal healthy subjects, and the human leukemia cell lines THP-1 and K-562 challenged with lipopolysaccharide (LPS) were subjected to RT-PCR using degenerate primers. The results indicated that the IRG1 gene is differentially expressed in human fetal PBMCs and LPS-stimulated adult PBMCs. The amplified gene fragment was cloned into the pET32a(+) vector and fusion-expressed with a His-tag in a prokaryotic system. After affinity chromatography, human IRG1h fusion proteins were isolated by SDS-PAGE and identified by mass spectrometric analysis for use as an immunogen to immunize rabbits. The titer and specificity of the purified rabbit antiserum were sufficient to measure human IRG1 gene expression in various tissues and cultures. This purified polyclonal antiserum will allow us to initiate studies to elucidate the biological roles of the human IRG1 gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Antibodies, Monoclonal / immunology
  • Blotting, Western
  • Carboxy-Lyases
  • Cell Line, Tumor
  • Electrophoresis, Polyacrylamide Gel
  • Embryo, Mammalian / metabolism
  • Female
  • Gene Expression Profiling*
  • Gene Expression Regulation, Developmental
  • Humans
  • Immune Sera / immunology*
  • K562 Cells
  • Leukocytes, Mononuclear / drug effects
  • Leukocytes, Mononuclear / metabolism
  • Lipopolysaccharides / pharmacology
  • Male
  • Molecular Sequence Data
  • Phylogeny
  • Proteins / classification
  • Proteins / genetics*
  • Proteins / metabolism*
  • Rabbits
  • Recombinant Proteins / analysis
  • Recombinant Proteins / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Substances

  • Antibodies, Monoclonal
  • Immune Sera
  • Lipopolysaccharides
  • Proteins
  • Recombinant Proteins
  • ACOD1 protein, human
  • Carboxy-Lyases