Analysis of the epitope structure of Plum pox virus coat protein

Phytopathology. 2011 May;101(5):611-9. doi: 10.1094/PHYTO-10-10-0274.

Abstract

Typing of the particular Plum pox virus (PPV) strain responsible in an outbreak has important practical implications and is frequently performed using strain-specific monoclonal antibodies (MAbs). Analysis in Western blots of the reactivity of 24 MAbs to a 112-amino-acid N-terminal fragment of the PPV coat protein (CP) expressed in Escherichia coli showed that 21 of the 24 MAbs recognized linear or denaturation-insensitive epitopes. A series of eight C-truncated CP fragments allowed the mapping of the epitopes recognized by the MAbs. In all, 14 of them reacted to the N-terminal hypervariable region, defining a minimum of six epitopes, while 7 reacted to the beginning of the core region, defining a minimum of three epitopes. Sequence comparisons allowed the more precise positioning of regions recognized by several MAbs, including those recognized by the 5B-IVIA universal MAb (amino acids 94 to 100) and by the 4DG5 and 4DG11 D serogroup-specific MAbs (amino acids 43 to 64). A similar approach coupled with infectious cDNA clone mutagenesis showed that a V74T mutation in the N-terminus of the CP abolished the binding of the M serogroup-specific AL MAb. Taken together, these results provide a detailed positioning of the epitopes recognized by the most widely used PPV detection and typing MAbs.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Antibodies, Monoclonal / immunology
  • Antibodies, Viral / immunology
  • Antibody Specificity / immunology*
  • Blotting, Western
  • Capsid Proteins / chemistry
  • Capsid Proteins / genetics
  • Capsid Proteins / immunology*
  • Enzyme-Linked Immunosorbent Assay
  • Epitope Mapping / methods
  • Epitopes / genetics
  • Epitopes / immunology*
  • Escherichia coli / genetics
  • Molecular Sequence Data
  • Plant Diseases / virology*
  • Plum Pox Virus / genetics
  • Plum Pox Virus / immunology*
  • Prunus / virology*
  • Recombinant Proteins / genetics
  • Recombinant Proteins / immunology
  • Sequence Alignment

Substances

  • Antibodies, Monoclonal
  • Antibodies, Viral
  • Capsid Proteins
  • Epitopes
  • Recombinant Proteins
  • coat protein, Plum pox virus