NSP2 gene variation of the North American genotype of the Thai PRRSV in central Thailand

Virol J. 2010 Nov 24:7:340. doi: 10.1186/1743-422X-7-340.

Abstract

Porcine reproductive and respiratory syndrome virus (PRRSV) is a major swine pathogen causing economic losses in the swine industry almost worldwide. PRRSV has been divided into 2 genotypes, the European (Type 1) and North American (Type 2) genotype, respectively and displays a large degree of genetic variability, particularly at the nonstructural protein (nsp) 2 gene. This is the first study determining genetic variation of the nsp2 of Thai PRRSV isolates. The results showed that 9 out of 10 Thai PRRSV isolates were nsp2-truncated viruses that might have evolved from a virus previously introduced in the past, but not from one recently introduced.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Genotype
  • Molecular Sequence Data
  • North America
  • Polymorphism, Genetic*
  • Porcine respiratory and reproductive syndrome virus / classification*
  • Porcine respiratory and reproductive syndrome virus / genetics*
  • Porcine respiratory and reproductive syndrome virus / isolation & purification
  • RNA, Viral / genetics
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Swine
  • Thailand
  • Viral Nonstructural Proteins / genetics*

Substances

  • RNA, Viral
  • Viral Nonstructural Proteins

Associated data

  • GENBANK/HM134182
  • GENBANK/HM134183
  • GENBANK/HM134184
  • GENBANK/HM134185
  • GENBANK/HM134186
  • GENBANK/HM134187
  • GENBANK/HM134188
  • GENBANK/HM134189
  • GENBANK/HM134190
  • GENBANK/HM134191