Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution

Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19748-53. doi: 10.1073/pnas.1009999107. Epub 2010 Oct 27.

Abstract

Protein biosynthesis, the translation of the genetic code into polypeptides, occurs on ribonucleoprotein particles called ribosomes. Although X-ray structures of bacterial ribosomes are available, high-resolution structures of eukaryotic 80S ribosomes are lacking. Using cryoelectron microscopy and single-particle reconstruction, we have determined the structure of a translating plant (Triticum aestivum) 80S ribosome at 5.5-Å resolution. This map, together with a 6.1-Å map of a Saccharomyces cerevisiae 80S ribosome, has enabled us to model ∼98% of the rRNA. Accurate assignment of the rRNA expansion segments (ES) and variable regions has revealed unique ES-ES and r-protein-ES interactions, providing insight into the structure and evolution of the eukaryotic ribosome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cryoelectron Microscopy*
  • Crystallography, X-Ray
  • Escherichia coli / metabolism
  • Escherichia coli / ultrastructure
  • Eukaryotic Cells / metabolism
  • Eukaryotic Cells / ultrastructure*
  • Humans
  • Models, Molecular*
  • Protein Biosynthesis*
  • RNA, Ribosomal / ultrastructure*
  • Ribosomes / chemistry*
  • Ribosomes / metabolism
  • Ribosomes / ultrastructure*
  • Saccharomyces cerevisiae / metabolism
  • Saccharomyces cerevisiae / ultrastructure
  • Triticum / metabolism
  • Triticum / ultrastructure

Substances

  • RNA, Ribosomal

Associated data

  • PDB/3IZ5
  • PDB/3IZ6
  • PDB/3IZ7
  • PDB/3IZ9
  • PDB/3IZB
  • PDB/3IZC
  • PDB/3IZD
  • PDB/3IZE
  • PDB/3IZF