H-NS forms a superhelical protein scaffold for DNA condensation

Proc Natl Acad Sci U S A. 2010 Sep 7;107(36):15728-32. doi: 10.1073/pnas.1006966107. Epub 2010 Aug 23.

Abstract

The histone-like nucleoid structuring (H-NS) protein plays a fundamental role in DNA condensation and is a key regulator of enterobacterial gene expression in response to changes in osmolarity, pH, and temperature. The protein is capable of high-order self-association via interactions of its oligomerization domain. Using crystallography, we have solved the structure of this complete domain in an oligomerized state. The observed superhelical structure establishes a mechanism for the self-association of H-NS via both an N-terminal antiparallel coiled-coil and a second, hitherto unidentified, helix-turn-helix dimerization interface at the C-terminal end of the oligomerization domain. The helical scaffold suggests the formation of a H-NS:plectonemic DNA nucleoprotein complex that is capable of explaining published biophysical and functional data, and establishes a unifying structural basis for coordinating the DNA packaging and transcription repression functions of H-NS.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Biopolymers / chemistry
  • DNA / chemistry*
  • DNA-Binding Proteins / chemistry*
  • Models, Molecular
  • Molecular Sequence Data
  • Sequence Homology, Amino Acid
  • Temperature

Substances

  • Bacterial Proteins
  • Biopolymers
  • DNA-Binding Proteins
  • H-NS protein, bacteria
  • DNA

Associated data

  • PDB/3NR7