Diversity of the transcriptional regulation of the pch gene cluster in two indigenous p-cresol-degradative strains of Pseudomonas fluorescens

FEMS Microbiol Ecol. 2010 Jun;72(3):464-75. doi: 10.1111/j.1574-6941.2010.00858.x. Epub 2010 Mar 8.

Abstract

p-Cresol methylhydroxylase (PCMH), a key enzyme responsible for the catabolism of p-cresol via the protocatechuate ortho pathway, was used as a tool to characterize catabolic differences between phenol- and p-cresol-degrading Pseudomonas fluore-scens strains PC18 and PC24. Although both strains catabolize p-cresol using PCMH, different whole-cell kinetic parameters for this compound were revealed. Affinity for the substrate and the specific growth rate were higher in PC18, whereas maximum p-cresol tolerance was higher in PC24. In addition, PCMH of strain PC18 was induced during growth on phenol. In both strains, the pchACXF operon, which encodes p-hydroxybenzaldehyde dehydrogenase and PCMH, was sequenced. Transcriptional regulation of these operons by PchR, a putative sigma(54)-dependent regulator, was shown. Although the promoters of these operons resembled sigma(54)-controlled promoters, they differed from the consensus sequence by having T instead of C at position -12. Complementation assays confirmed that the amino acid sequence differences of the PchR regulators between the two strains studied led to different effector-binding capabilities of these proteins: (1) phenol was a more efficient effector for PchR of PC18 than p-cresol, (2) phenol did not activate the regulator of PC24, and (3) both regulators responded similarly to p-cresol.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Cresols / metabolism
  • DNA, Bacterial / genetics
  • Gene Expression Regulation, Bacterial
  • Mixed Function Oxygenases / genetics*
  • Mixed Function Oxygenases / metabolism
  • Molecular Sequence Data
  • Multigene Family*
  • Operon*
  • Oxidation-Reduction
  • Phenol / metabolism
  • Promoter Regions, Genetic
  • Pseudomonas fluorescens / enzymology
  • Pseudomonas fluorescens / genetics*
  • Pseudomonas fluorescens / growth & development
  • Sequence Alignment
  • Sequence Analysis, DNA
  • Substrate Specificity
  • Transcription, Genetic

Substances

  • Cresols
  • DNA, Bacterial
  • 4-cresol
  • Phenol
  • Mixed Function Oxygenases
  • 4-cresol dehydrogenase (hydroxylating)