Diversity of STLV-1 strains in wild chimpanzees (Pan troglodytes verus) from Côte d'Ivoire

Virus Res. 2010 Jun;150(1-2):143-7. doi: 10.1016/j.virusres.2010.02.020. Epub 2010 Mar 7.

Abstract

Simian T-lymphotropic viruses type 1 (STLV-1) are regarded as a highly conserved group of viruses with genotypes clustering according to geographic regions rather than to infected species. In free living West African chimpanzees we have described a variety of STLV-1 strains and suggested that this diversity results from interspecies transmissions. Here we present new data on STLV-1 infections in these chimpanzees with the presence of two new distinct clades, proposing the establishing of two new STLV-1 subtypes. Moreover, in one of the chimpanzees, the Central African STLV-1 subtype B was detected. The STLV-1 strains detected here display a much wider diversity than heretofore reported for STLV-1 with presence of three distinct subtypes in chimpanzees from one distinct geographic region. In conclusion, the hypothesis of primate T-lymphotropic virus type 1 (PTLV-1) clustering by geography rather than host should be reconsidered, at least regarding STLV-1 infections in chimpanzees.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Ape Diseases / epidemiology
  • Ape Diseases / virology*
  • Cluster Analysis
  • Cote d'Ivoire / epidemiology
  • Deltaretrovirus Infections / epidemiology
  • Deltaretrovirus Infections / veterinary*
  • Deltaretrovirus Infections / virology
  • Molecular Epidemiology
  • Molecular Sequence Data
  • Pan troglodytes / virology*
  • Phylogeny
  • Polymorphism, Genetic*
  • RNA, Viral / genetics*
  • Sequence Analysis, DNA
  • Sequence Homology
  • Simian T-lymphotropic virus 1 / classification*
  • Simian T-lymphotropic virus 1 / genetics*
  • Simian T-lymphotropic virus 1 / isolation & purification

Substances

  • RNA, Viral

Associated data

  • GENBANK/GU168945
  • GENBANK/GU168946
  • GENBANK/GU168947
  • GENBANK/GU168948
  • GENBANK/GU168949
  • GENBANK/GU168950
  • GENBANK/GU168951
  • GENBANK/GU168952
  • GENBANK/GU168953
  • GENBANK/GU168954
  • GENBANK/GU168955
  • GENBANK/GU168956
  • GENBANK/GU168957