Binding of natural and synthetic polyphenols to human dihydrofolate reductase

Int J Mol Sci. 2009 Dec 18;10(12):5398-5410. doi: 10.3390/ijms10125398.

Abstract

Dihydrofolate reductase (DHFR) is the subject of intensive investigation since it appears to be the primary target enzyme for antifolate drugs. Fluorescence quenching experiments show that the ester bond-containing tea polyphenols (-)-epigallocatechin gallate (EGCG) and (-)-epicatechin gallate (ECG) are potent inhibitors of DHFR with dissociation constants (K(D))of 0.9 and 1.8 microM, respectively, while polyphenols lacking the ester bound gallate moiety [e.g., (-)-epigallocatechin (EGC) and (-)-epicatechin (EC)] did not bind to this enzyme. To avoid stability and bioavailability problems associated with tea catechins we synthesized a methylated derivative of ECG (3-O-(3,4,5-trimethoxybenzoyl)-(-)-epicatechin; TMECG), which effectively binds to DHFR (K(D) = 2.1 microM). In alkaline solution, TMECG generates a stable quinone methide product that strongly binds to the enzyme with a K(D) of 8.2 nM. Quercetin glucuronides also bind to DHFR but its effective binding was highly dependent of the sugar residue, with quercetin-3-xyloside being the stronger inhibitor of the enzyme with a K(D) of 0.6 microM. The finding that natural polyphenols are good inhibitors of human DHFR could explain the epidemiological data on their prophylactic effects for certain forms of cancer and open a possibility for the use of natural and synthetic polyphenols in cancer chemotherapy.

Keywords: antifolates; dihydrofolate reductase; enzyme inhibition; flavonoids; polyphenols; tea catechins.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Binding Sites
  • Catechin / analogs & derivatives
  • Catechin / chemical synthesis
  • Catechin / chemistry
  • Folic Acid Antagonists / chemistry*
  • Folic Acid Antagonists / pharmacology
  • Glucuronides / chemistry
  • Glucuronides / pharmacology
  • Humans
  • Indolequinones / chemistry
  • Indolequinones / pharmacology
  • Molecular Docking Simulation
  • Molecular Sequence Data
  • Polyphenols / chemistry*
  • Polyphenols / pharmacology
  • Protein Binding
  • Quercetin / chemistry
  • Tetrahydrofolate Dehydrogenase / chemistry*
  • Tetrahydrofolate Dehydrogenase / metabolism

Substances

  • 3-O-(3,4,5-trimethoxybenzoyl)epicatechin
  • Folic Acid Antagonists
  • Glucuronides
  • Indolequinones
  • Polyphenols
  • quinone methide
  • Catechin
  • Quercetin
  • Tetrahydrofolate Dehydrogenase