On the use of N-dicyclopropylmethyl aspartyl-glycine synthone for backbone amide protection

J Pept Sci. 2010 Jan;16(1):65-70. doi: 10.1002/psc.1196.

Abstract

To prevent aspartimide formation and related side products in Asp-Xaa, particularly Asp-Gly-containing peptides, usually the 2-hydroxy-4-methoxybenzyl (Hmb) backbone amide protection is applied for peptide synthesis according to the Fmoc-protocols. In the present study, the usefulness of the recently proposed acid-labile dicyclopropylmethyl (Dcpm) protectant was analyzed. Despite the significant steric hindrance of this bulky group, N-terminal H-(Dcpm)Gly-peptides are quantitatively acylated by potent acylating agents, and alternatively the dipeptide Fmoc-Asp(OtBu)-(Dcpm)Gly-OH derivative can be used as a building block. In contrast to the Hmb group, Dcpm is inert toward acylations, but is readily removed in the acid deprotection and resin-cleavage step.

MeSH terms

  • Amides / chemistry*
  • Amino Acid Sequence
  • Chromatography, High Pressure Liquid
  • Dipeptides / chemistry*
  • Molecular Sequence Data
  • Nuclear Magnetic Resonance, Biomolecular
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Substances

  • Amides
  • Dipeptides