An L-arabinose isomerase from Acidothermus cellulolytics ATCC 43068: cloning, expression, purification, and characterization

Appl Microbiol Biotechnol. 2010 Apr;86(4):1089-97. doi: 10.1007/s00253-009-2322-z. Epub 2009 Nov 17.

Abstract

The araA gene encoding an L-arabinose isomerase (L-AI) from the acido-thermophilic bacterium Acidothermus cellulolytics ATCC 43068 was cloned and overexpressed in Escherichia coli. The open reading frame of the L-AI consisted of 1,503 nucleotides encoding 501 amino acid residues. The recombinant L-AI was purified to homogeneity by heat treatment, ion-exchange chromatography, and gel filtration. The molecular mass of the enzyme was estimated to be approximately 55 kDa by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The purified enzyme was optimally active at 75 degrees C and pH 7.5. It required divalent metal ions, either Mn(2+) or Co(2+), for both enzymatic activity and thermostability improvement at higher temperatures. The enzyme showed relatively high activity and stability at acidic pH. It exhibited over 90% of its maximal activity at pH 6.0 and retained 80% of activity after 12 h incubation at pH 6.0. Catalytic property study showed that the enzyme had an interesting catalytic efficiency. Its apparent K (m), V (max), and catalytic efficiency (k (cat)/K (m)) for D-galactose was 28.9 mM, 4.9 U/mg, and 9.3 mM(-1) min(-1), respectively. The enzyme carried out the isomerization of D-galactose to D-tagatose with a conversion yield over 50% after 12 h under optimal conditions, suggesting its potential in D-tagatose production.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / enzymology*
  • Actinomycetales / genetics
  • Aldose-Ketose Isomerases / chemistry
  • Aldose-Ketose Isomerases / genetics*
  • Aldose-Ketose Isomerases / metabolism*
  • Amino Acid Sequence
  • Cations, Divalent / pharmacology
  • Cloning, Molecular
  • Coenzymes
  • DNA, Fungal / chemistry
  • DNA, Fungal / genetics
  • Electrophoresis, Polyacrylamide Gel
  • Enzyme Stability
  • Escherichia coli / genetics
  • Fungal Proteins / genetics*
  • Fungal Proteins / metabolism*
  • Galactose / metabolism
  • Gene Expression
  • Hexoses / metabolism
  • Hydrogen-Ion Concentration
  • Kinetics
  • Metals / pharmacology
  • Molecular Sequence Data
  • Molecular Weight
  • Open Reading Frames
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / isolation & purification
  • Recombinant Proteins / metabolism
  • Sequence Analysis, DNA
  • Temperature

Substances

  • Cations, Divalent
  • Coenzymes
  • DNA, Fungal
  • Fungal Proteins
  • Hexoses
  • Metals
  • Recombinant Proteins
  • Aldose-Ketose Isomerases
  • L-arabinose isomerase
  • tagatose
  • Galactose