We present a generic criterion which can be used in gravitational-wave data analysis to distinguish an extreme-mass-ratio inspiral into a Kerr background spacetime from one into a non-Kerr spacetime. We exploit the fact that when an integrable system, such as the system that describes geodesic orbits in a Kerr spacetime, is perturbed, the tori in phase space which initially corresponded to resonances disintegrate so as to form Birkhoff chains on a surface of section. The KAM curves of the islands in such a chain share the same ratio of frequencies, even though the frequencies themselves vary from one KAM curve to another inside an island. However the KAM curves, which do not lie in a Birkhoff chain, do not share this characteristic property. Such a temporal constancy of the ratio of frequencies during the evolution of the gravitational-wave signal will signal a non-Kerr spacetime.