Pseudomonas caeni sp. nov., a denitrifying bacterium isolated from the sludge of an anaerobic ammonium-oxidizing bioreactor

Int J Syst Evol Microbiol. 2009 Oct;59(Pt 10):2594-8. doi: 10.1099/ijs.0.005108-0. Epub 2009 Jul 21.

Abstract

Two Gram-negative, rod-shaped, motile, aerobic bacterial strains designated HY-14(T) and HY-24 were isolated from the sludge of an anaerobic ammonium-oxidizing bioreactor. The strains could not grow with 5 % (w/v) NaCl, did not produce acid from d-glucose or utilize d-glucose, gluconate or citrate as a sole carbon source. Summed feature 3 and C(16 : 0) were the most abundant fatty acids; hydroxyl fatty acids C(12 : 0) 3-OH and C(10 : 0) 3-OH were also present. Fatty acid C(12 : 0) 2-OH was absent. The DNA G+C contents of strains HY-14(T) and HY-24 were 50.6+/-0.5 mol%. Phylogenetic analyses based on 16S rRNA gene sequences showed that strains HY-14(T) and HY-24 formed a monophyletic clade within the genus Pseudomonas. The highest sequence similarities were to Pseudomonas pseudoalcaligenes DSM 50188(T) (95.9 %). On the basis of phenotypic and phylogenetic properties, strains HY-14(T) and HY-24 are proposed as a novel species of the genus Pseudomonas, for which the name Pseudomonas caeni sp. nov. is proposed. The type strain is HY-14(T) (=KCTC 22292(T)=CCTCC AB208156(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anaerobiosis
  • Bioreactors / microbiology*
  • DNA, Bacterial / genetics
  • DNA, Ribosomal / genetics
  • Molecular Sequence Data
  • Nitrites / metabolism*
  • Oxidation-Reduction
  • Phylogeny
  • Pseudomonas / classification
  • Pseudomonas / genetics
  • Pseudomonas / isolation & purification*
  • Pseudomonas / metabolism*
  • Quaternary Ammonium Compounds / metabolism*
  • RNA, Ribosomal, 16S / genetics
  • Sewage / microbiology*

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Nitrites
  • Quaternary Ammonium Compounds
  • RNA, Ribosomal, 16S
  • Sewage

Associated data

  • GENBANK/EU620679
  • GENBANK/EU620680