Sugar nucleotide recognition by Klebsiella pneumoniae UDP-D-galactopyranose mutase: fluorinated substrates, kinetics and equilibria

Org Biomol Chem. 2009 Mar 7;7(5):1009-16. doi: 10.1039/b815549f. Epub 2009 Jan 23.

Abstract

A series of selectively fluorinated and other substituted UDP-D-galactose derivatives have been evaluated as substrates for Klebsiella pneumoniae UDP-D-galactopyranose mutase. This enzyme, which catalyses the interconversion of the pyranose and furanose forms of galactose as its UDP adduct, is a prospective drug target for a variety of microbial infections. We show that none of the 2''-, 3''- or 6''-hydroxyl groups of UDP-D-galactopyranose are essential for substrate binding and turnover. However, steric factors appear to play an important role in limiting the range of substitutions that can be accommodated at C-2'' and C-6'' of the sugar nucleotide substrate. Attempts to invert the C-2'' stereochemistry from equatorial to axial, changing D-galacto- to D-talo-configuration, in an attempt to exploit the higher percentage of furanose at equilibrium in the talo-series, met with no turnover of substrate.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-Bacterial Agents / chemistry
  • Drug Delivery Systems
  • Fluorine
  • Intramolecular Transferases / drug effects*
  • Intramolecular Transferases / metabolism
  • Kinetics
  • Klebsiella pneumoniae / enzymology*
  • Nucleotides
  • Structure-Activity Relationship
  • Substrate Specificity

Substances

  • Anti-Bacterial Agents
  • Nucleotides
  • Fluorine
  • Intramolecular Transferases
  • UDP-galactopyranose mutase