Chapter 7. Nonsense-mediated mRNA decay in Caenorhabditis elegans

Methods Enzymol. 2008:449:149-64. doi: 10.1016/S0076-6879(08)02407-5.

Abstract

The nonsense-mediated mRNA decay (NMD) pathway is a surveillance mechanism that targets the degradation of mRNAs harboring premature termination codons (PTCs). Two key aspects of NMD are the definition of a PTC codon and the identification of the molecular machinery dedicated to this mechanism. This chapter describes the development of transgenic reporters as well as the use of genome-wide RNAi and genetic screens to identify novel components of the NMD pathway in the nematode Caenorhabditis elegans.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Caenorhabditis elegans / genetics*
  • Codon, Nonsense / genetics
  • RNA Interference / physiology
  • RNA Stability / genetics*

Substances

  • Codon, Nonsense