PU.1 expression is modulated by the balance of functional sense and antisense RNAs regulated by a shared cis-regulatory element

Genes Dev. 2008 Aug 1;22(15):2085-92. doi: 10.1101/gad.1654808.

Abstract

The transcription factor PU.1 is an important regulator of hematopoiesis; precise expression levels are critical for normal hematopoietic development and suppression of leukemia. We show here that noncoding antisense RNAs are important modulators of proper dosages of PU.1. Antisense and sense RNAs are regulated by shared evolutionarily conserved cis-regulatory elements, and we can show that antisense RNAs inhibit PU.1 expression by modulating mRNA translation. We propose that such antisense RNAs will likely be important in the regulation of many genes and may be the reason for the large number of overlapping complementary transcripts with so far unknown function.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cell Line
  • Electroporation
  • Gene Expression*
  • Granulocytes / cytology
  • Granulocytes / metabolism
  • HL-60 Cells
  • Humans
  • Immunomagnetic Separation
  • Jurkat Cells
  • Macrophages / metabolism
  • Mice
  • Models, Genetic
  • Protein Biosynthesis
  • Proto-Oncogene Proteins / genetics*
  • RNA Interference
  • RNA, Antisense / genetics
  • RNA, Antisense / metabolism*
  • RNA, Messenger / genetics
  • RNA, Messenger / metabolism
  • RNA, Small Interfering / metabolism
  • Regulatory Sequences, Nucleic Acid / genetics*
  • T-Lymphocytes / metabolism
  • Trans-Activators / genetics*
  • Transcription, Genetic
  • U937 Cells

Substances

  • Proto-Oncogene Proteins
  • RNA, Antisense
  • RNA, Messenger
  • RNA, Small Interfering
  • Trans-Activators
  • proto-oncogene protein Spi-1