Phylogenetic relationships within Passerida (Aves: Passeriformes): a review and a new molecular phylogeny based on three nuclear intron markers

Mol Phylogenet Evol. 2008 Sep;48(3):858-76. doi: 10.1016/j.ympev.2008.05.029. Epub 2008 Jul 10.

Abstract

The avian clade Passerida was first identified based on DNA-DNA hybridization data [C.G. Sibley, J.E. Ahlquist, Phylogeny and Classification of Birds, 1990, Yale University Press, New Haven, CT]. Monophyly of the Passerida, with the exception of a few taxa, has later been corroborated in several studies; however, the basal phylogenetic relationships have remained poorly understood. In this paper, we review the current knowledge of the phylogenetic relationships within Passerida and present a new phylogeny based on three nuclear introns (myoglobin intron 2, ornithine decarboxylase introns 6 and 7, as well as beta-fibrinogen intron 5). Our findings corroborate recent molecular hypotheses, but also identify several hitherto unrecognized relationships.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Bayes Theorem
  • Cell Nucleus / metabolism*
  • DNA, Mitochondrial / genetics
  • Evolution, Molecular
  • Fibrinogen / genetics
  • Introns*
  • Models, Genetic
  • Myoglobin / genetics
  • Ornithine Decarboxylase / genetics
  • Passeriformes / genetics*
  • Phylogeny

Substances

  • DNA, Mitochondrial
  • Myoglobin
  • Fibrinogen
  • Ornithine Decarboxylase