Evidence that two enzyme-derived histidine ligands are sufficient for iron binding and catalysis by factor inhibiting HIF (FIH)

J Biol Chem. 2008 Sep 19;283(38):25971-8. doi: 10.1074/jbc.M804999200. Epub 2008 Jul 8.

Abstract

A 2-His-1-carboxylate triad of iron binding residues is present in many non-heme iron oxygenases including the Fe(II) and 2-oxoglutarate (2OG)-dependent dioxygenases. Three variants (D201A, D201E, and D201G) of the iron binding Asp-201 residue of an asparaginyl hydroxylase, factor inhibiting HIF (FIH), were made and analyzed. FIH-D201A and FIH-D201E did not catalyze asparaginyl hydroxylation, but in the presence of a reducing agent, they displayed enhanced 2OG turnover when compared with wild-type FIH. Turnover of 2OG by FIH-D201A was significantly stimulated by the addition of HIF-1alpha(786-826) peptide. Like FIH-D201A and D201E, the D201G variant enhanced 2OG turnover but rather unexpectedly catalyzed asparaginyl hydroxylation. Crystal structures of the FIH-D201A and D201G variants in complex with Fe(II)/Zn(II), 2OG, and HIF-1alpha(786-826/788-806) implied that only two FIH-based residues (His-199 and His-279) are required for metal binding. The results indicate that variation of 2OG-dependent dioxygenase iron-ligating residues as a means of functional assignment should be treated with caution. The results are of mechanistic interest in the light of recent biochemical and structural analyses of non-heme iron and 2OG-dependent halogenases that are similar to the FIH-D201A/G variants in that they use only two His-residues to ligate iron.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Catalysis
  • Crystallography, X-Ray / methods
  • Dioxygenases / chemistry
  • Heme / chemistry
  • Histidine / chemistry*
  • Humans
  • Iron / chemistry*
  • Ketoglutaric Acids / chemistry
  • Ligands
  • Metals / chemistry
  • Mixed Function Oxygenases
  • Models, Chemical
  • Models, Molecular
  • Molecular Conformation
  • Protein Binding
  • Repressor Proteins / chemistry*
  • Repressor Proteins / metabolism

Substances

  • Ketoglutaric Acids
  • Ligands
  • Metals
  • Repressor Proteins
  • Heme
  • Histidine
  • Iron
  • Mixed Function Oxygenases
  • Dioxygenases
  • HIF1AN protein, human

Associated data

  • PDB/2ILM
  • PDB/3D8C