The deletion of amino acids 114-121 in the TM1 domain of mouse prion protein stabilizes its conformation but does not affect the overall structure

Biochim Biophys Acta. 2008 Jun;1783(6):1076-84. doi: 10.1016/j.bbamcr.2007.11.007. Epub 2007 Nov 29.

Abstract

A mutant of mouse prion protein (PrPC) carrying a deletion of residues 114-121 (PrPDelta114-121) has previously been described to lack convertibility into the scrapie-associated isoform of PrP (PrPSc) and to exhibit a dominant-negative effect on the conversion of wild-type PrPC into PrPSc in living cells. Here we report the characterization of recombinantly expressed PrPDelta114-121 by Fourier-transformation infrared spectroscopy (FTIR) and circular dichroism (CD) spectroscopy. The analysis of spectra revealed an increased antiparallel beta-sheet content in the deletion mutant compared to wild-type PrPC. This additional short beta-sheet stabilized the fold of the mutant protein by DeltaDeltaG(0)'=3.4+/-0.3 kJ mol(-1) as shown by chemical unfolding experiments using guanidine hydrochloride. Secondary structure predictions suggest that the additional beta-sheet in PrPDelta114-121 is close to the antiparallel beta-sheet in PrPC. The high-affinity Cu2+-binding site outside the octarepeats, which is located close to the deletion and involves His110 as a ligand, was not affected, as detected by electron paramagnetic resonance (EPR) spectroscopy, suggesting that Cu2+ binding does not contribute to the protection of PrPDelta114-121 from conversion into PrPSc. We propose that the deletion of residues 114-121 stabilizes the mutant protein. This stabilization most likely does not obstruct the interaction of PrPDelta114-121 with PrPSc but represents an energy barrier that blocks the conversion of PrPDelta114-121 into PrPSc.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Binding Sites
  • Circular Dichroism
  • Copper / metabolism
  • Electron Spin Resonance Spectroscopy
  • Mice
  • Molecular Sequence Data
  • Mutation / genetics*
  • PrPSc Proteins / chemistry
  • Prion Proteins
  • Prions / chemistry*
  • Prions / genetics
  • Prions / isolation & purification
  • Prions / metabolism
  • Protein Conformation
  • Protein Denaturation
  • Protein Folding
  • Sequence Deletion
  • Spectroscopy, Fourier Transform Infrared

Substances

  • PrPSc Proteins
  • Prion Proteins
  • Prions
  • Prnp protein, mouse
  • Copper