cDNA cloning and characterization of temperature-acclimation-associated light meromyosins from grass carp fast skeletal muscle

Comp Biochem Physiol B Biochem Mol Biol. 2008 Feb;149(2):378-87. doi: 10.1016/j.cbpb.2007.10.012. Epub 2007 Nov 4.

Abstract

The three types of cDNA clones, previously defined as the 10 degrees C, intermediate and 30 degrees C-types [Tao, Y., Kobayashi, M., Liang, C.S., Okamoto, T., Watabe, S., 2004. Temperature-dependent expression patterns of grass carp fast skeletal myosin heavy chain genes. Comp. Biochem. Physiol. B 139, 649-656], were determined for their 5'-regions which encoded at least the C-terminal half of myosin rod, light meromyosin (LMM), in fast skeletal muscles of grass carp Ctenopharyngodon idella. The deduced amino acid sequence identity was 91.1% between the 10 degrees C and 30 degrees C-types and 91.4% between the 10 degrees C and intermediate-types, whereas a high sequence identity of 97.8% was found between the intermediate and 30 degrees C-types. These three grass carp LMMs all had a characteristic seven-residue (heptad) repeat (a, b, c, d, e, f, g)(n), where positions a and d were normally occupied by hydrophobic residues, and positions b, c and f by charged residues. However, the ratios of hydrophobic residues to the total were higher for the intermediate- and 30 degrees C- than 10 degrees C-type LMM, suggesting that the former both types may form more stable coiled-coils of alpha-helices than the latter type. These differences in the primary structures of LMM isoforms might be partially implicated in differences in the thermostabilities and gel-forming profiles of myosins from grass carp in different seasons reported previously [Tao, Y., Kobayashi, M., Fukushima, H., Watabe, S., 2005. Changes in enzymatic and structural properties of grass carp fast skeletal myosin induced by the laboratory-conditioned thermal acclimation and seasonal acclimatization. Fish. Sci. 71, 195-204; Tao, Y., Kobayashi, M., Fukushima, H., Watabe, S., 2007. Changes in rheological properties of grass carp fast skeletal myosin induced by seasonal acclimatization. Fish. Sci. 73, 189-196].

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acclimatization / genetics*
  • Amino Acid Sequence
  • Animals
  • Carps / genetics*
  • Carps / metabolism
  • Cloning, Molecular
  • DNA, Complementary / isolation & purification
  • Hydrophobic and Hydrophilic Interactions
  • Molecular Sequence Data
  • Muscle Fibers, Fast-Twitch / metabolism
  • Muscle, Skeletal / metabolism*
  • Myosin Subfragments / chemistry
  • Myosin Subfragments / genetics*
  • Myosin Subfragments / metabolism
  • Phylogeny
  • Protein Isoforms / genetics
  • Protein Structure, Secondary
  • Seasons
  • Sequence Homology, Amino Acid
  • Temperature*

Substances

  • DNA, Complementary
  • Myosin Subfragments
  • Protein Isoforms